STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN66009.1ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain. (555 aa)    
Predicted Functional Partners:
SFN65994.1
Multidrug resistance efflux pump.
 0.984
SFN65971.1
Outer membrane efflux protein.
 
 
 0.957
SFN66031.1
Transcriptional regulator, TetR family.
 
     0.956
SFN43947.1
ATP-binding cassette, subfamily B.
   
 
0.818
SFN75799.1
ATP-binding cassette, subfamily B, MsbA.
   
 
0.818
SFN72759.1
ATP-binding cassette, subfamily B.
   
 
0.818
SFN88198.1
ABC-type multidrug transport system, ATPase and permease component.
   
 
0.818
SFN66206.1
HlyD family secretion protein.
  
 0.729
SFN91828.1
Multidrug resistance efflux pump.
  
 0.729
SFN66054.1
Phosphate-selective porin O and P.
 
    0.627
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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