STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN66153.1ABC-type multidrug transport system, ATPase component. (300 aa)    
Predicted Functional Partners:
SFN66114.1
ABC-2 type transport system permease protein.
 
  0.992
SFN66090.1
ABC-2 type transport system permease protein.
 
  0.989
SFN66206.1
HlyD family secretion protein.
 
    0.934
SFN66225.1
Outer membrane protein TolC.
 
     0.933
SFN66239.1
Transcriptional regulator, TetR family.
 
     0.923
SFN46314.1
ABC-2 type transport system ATP-binding protein.
 
    
0.855
SFN66173.1
Peroxiredoxin, SACOL1771 subfamily.
       0.773
SFN81289.1
Protein involved in gliding motility GldG.
  
 0.734
SFN66190.1
Hypothetical protein.
       0.714
SFN50070.1
ABC-2 type transport system permease protein.
 
 
  0.677
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.