STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN69477.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
SFN94950.1
Glycosyl transferases group 1.
  
     0.656
SFN73224.1
Hypothetical protein.
  
     0.637
SFN54784.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.615
SFN82588.1
Hypothetical protein.
  
     0.604
SFN54769.1
Lipid A 3-O-deacylase (PagL).
  
     0.599
SFN69459.1
ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family.
       0.569
SFN52173.1
Hypothetical protein.
  
     0.559
SFN69627.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.529
SFN45116.1
acyl-CoA thioester hydrolase.
  
     0.511
SFN74241.1
Arsenate reductase, glutaredoxin family; Belongs to the ArsC family.
  
     0.488
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.