STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN76366.1Haem-binding domain-containing protein. (157 aa)    
Predicted Functional Partners:
SFN76378.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.741
SFN48547.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
 0.694
SFN76195.1
40-residue YVTN family beta-propeller repeat-containing protein.
  
 
 0.694
SFN81080.1
Por secretion system C-terminal sorting domain-containing protein.
  
 
 0.694
SFN43034.1
Outer membrane protein OmpA.
  
   0.600
SFN47841.1
WD40-like Beta Propeller Repeat.
  
   0.600
SFN76349.1
Hypothetical protein.
       0.568
SFN76399.1
ATP-binding cassette, subfamily F, member 3.
       0.549
SFN47446.1
WD40-like Beta Propeller Repeat.
  
   0.501
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.