STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN72566.1Glycosyltransferase involved in cell wall bisynthesis. (338 aa)    
Predicted Functional Partners:
SFN72556.1
O-antigen ligase like membrane protein.
 
 
  0.943
SFN72577.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
  
 0.868
SFN46465.1
phenylacetate-CoA ligase.
 
     0.809
SFN53331.1
Protein involved in gliding motility RemB.
  
     0.765
SFN45029.1
Hypothetical protein.
  
     0.765
SFN72512.1
Phosphatidylinositol alpha-1,6-mannosyltransferase.
 
     0.754
SFN97202.1
Protein involved in gliding motility EpsB.
 
  
 0.739
SFN72532.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.730
SFN55524.1
Exosortase family protein XrtF.
  
     0.727
SFN82095.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.681
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.