STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN82660.1Hypothetical protein. (339 aa)    
Predicted Functional Partners:
cmk
Cytidylate kinase.
       0.816
SFN53257.1
Protein involved in gliding motility SprA.
  
   0.813
SFN89152.1
Peptidase family C25.
 
   
 0.796
SFN37798.1
Cell division protein FtsQ.
  
 
 0.787
SFN44964.1
Two component regulator propeller.
  
     0.775
SFN43138.1
Hypothetical protein.
  
     0.774
SFN72601.1
Hypothetical protein.
  
     0.773
SFN98605.1
Hypothetical protein.
  
     0.771
SFN54526.1
Hypothetical protein.
  
     0.743
SFN89136.1
Hypothetical protein.
 
     0.712
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.