STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN91899.1Glycosyl transferase family 2. (282 aa)    
Predicted Functional Partners:
SFN91910.1
Hypothetical protein.
 
     0.835
SFN65194.1
Hypothetical protein.
  
     0.742
SFN46302.1
Protein involved in gliding motility SprE.
  
   0.658
SFN99305.1
N-Dimethylarginine dimethylaminohydrolase.
  
     0.650
SFN52848.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
 0.590
SFN49923.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
 0.590
SFN67877.1
Polysaccharide deacetylase.
  
 
 0.590
SFN85765.1
Tetratricopeptide repeat-containing protein.
  
   0.581
SFN86021.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
  
     0.557
SFN75977.1
Hypothetical protein.
 
     0.538
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.