STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN98383.1Hypothetical protein. (433 aa)    
Predicted Functional Partners:
SFN98367.1
DNA repair protein RadC; Belongs to the UPF0758 family.
       0.816
SFN98402.1
Putative hydrolase of the HAD superfamily.
       0.816
SFN98419.1
Hypothetical protein.
 
     0.765
SFN55809.1
Protein involved in gliding motility GldN.
  
     0.610
SFN81863.1
Protein of unknown function.
  
     0.575
SFN69823.1
Protein of unknown function.
  
     0.568
SFN82151.1
Hypothetical protein.
  
     0.551
SFN74340.1
Protein of unknown function.
  
     0.548
SFN46054.1
Sporulation related domain-containing protein.
  
     0.545
SFN98351.1
Negative transcriptional regulator, PaiB family.
       0.542
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.