STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO01840.1SprB repeat-containing protein. (1153 aa)    
Predicted Functional Partners:
SFO01488.1
Hypothetical protein.
 
      0.684
SFO01824.1
Hypothetical protein.
       0.664
SFN82893.1
WD40-like Beta Propeller Repeat.
  
 
   0.537
SFN47841.1
WD40-like Beta Propeller Repeat.
 
  0.523
SFN82932.1
Gliding motility-associated C-terminal domain-containing protein.
 
     0.503
SFN43034.1
Outer membrane protein OmpA.
 
  0.499
SFN62979.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.491
SFN61665.1
Por secretion system C-terminal sorting domain-containing protein.
    
  0.489
SFN46543.1
Hypothetical protein.
    
   0.485
SFN47354.1
Subtilase family protein; Belongs to the peptidase S8 family.
   
  0.462
Your Current Organism:
Bizionia echini
NCBI taxonomy Id: 649333
Other names: B. echini, Bizionia echini Nedashkovskaya et al. 2010, Bizionia sp. KMM 6177, DSM 23925, KCTC 22015, KMM 6177, LMG 25220, LMG:25220
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.