STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_0275Esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: srm:SRM_02222 putative esterase; PFAM: esterase; SPTR: Putative esterase superfamily protein; PFAM: Putative esterase. (339 aa)    
Predicted Functional Partners:
Lbys_0277
InterPro IPR010839; KEGG: sli:Slin_4147 protein of unknown function DUF1446; PFAM: protein of unknown function DUF1446; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1446).
 
    0.816
Lbys_0278
KEGG: sli:Slin_4148 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.811
Lbys_0276
citrate/H+ symporter, CitMHS family; COGs: COG2851 H+/citrate symporter; InterPro IPR014738:IPR004680; KEGG: sli:Slin_4146 citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; SPTR: Citrate/H+ symporter, CitMHS family; TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; TIGRFAM: citrate transporter, CitMHS family.
 
     0.808
Lbys_0273
Esterase; COGs: COG2382 Enterochelin esterase; InterPro IPR004193:IPR000801; KEGG: pdi:BDI_2687 putative glycosylhydrolase; PFAM: esterase; glycoside hydrolase family 13 domain protein; SPTR: Putative esterase; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Putative esterase.
 
    
0.656
Lbys_0274
COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR017975:IPR019800:IPR001764:IPR002772; KEGG: pdi:BDI_2428 beta-glucosidase; PFAM: glycoside hydrolase family 3 domain protein; SPTR: Glycoside hydrolase family 3 protein; PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Belongs to the glycosyl hydrolase 3 family.
       0.618
Lbys_0272
Esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: dfe:Dfer_0298 putative esterase; PFAM: esterase; SPTR: Putative uncharacterized protein; PFAM: Putative esterase.
 
    
0.550
Lbys_1159
InterPro IPR002035; KEGG: sus:Acid_2953 von Willebrand factor, type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor, type A; PFAM: von Willebrand factor type A domain.
  
     0.405
Lbys_2912
Hypothetical protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
  
     0.404
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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