STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
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[Homology]
Score
Lbys_0355Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR018060:IPR005467:IPR001789:IPR018062:IPR 011110:IPR011123:IPR003661:IPR003594:IPR000005:IPR004358; KEGG: bth:BT_3334 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system'); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; [...] (1288 aa)    
Predicted Functional Partners:
Lbys_0503
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467:IPR001789:IPR000014:IPR000700:IPR 008207:IPR003018:IPR013767:IPR013655:IPR013656:IPR003661:I PR003594:IPR001610:IPR004358; KEGG: fba:FIC_01779 PAS/PAC domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS domain containin [...]
 
 
0.987
Lbys_1292
COGs: COG0642 Signal transduction histidine kinase; InterProIPR013767:IPR003018:IPR003661:IPR003594:IPR 001789:IPR008207:IPR005467:IPR000014:IPR000700:IPR001610:I PR004358; KEGG: dfe:Dfer_5761 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; GAF domain protein; response regulator receiver; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; GAF domai [...]
 
 
0.986
Lbys_2753
PAS/PAC sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR000014:IPR003661:IPR003594:IPR004358:IPR 005467:IPR000700:IPR013767; KEGG: dfe:Dfer_5317 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine ki [...]
 
 
0.979
Lbys_0269
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR018062:IPR011110:IPR011123:IPR003661:IPR 003594:IPR001789:IPR000005:IPR004358:IPR018060:IPR005467; KEGG: pru:PRU_2699 sensor histidine kinase/DNA-binding response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; ATP-binding region ATPase domain protein [...]
 
 
0.976
Lbys_0837
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR018060:IPR005467:IPR001789:IPR018062:IPR 004358:IPR003661:IPR003594:IPR011110:IPR011123:IPR000005; KEGG: bth:BT_3049 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system'); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; [...]
 
 
0.975
Lbys_2125
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR001789:IPR018060:IPR 011110:IPR011123:IPR000005:IPR005467; KEGG: phe:Phep_1317 ATP-binding region ATPase domain protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain prote [...]
 
 
0.975
Lbys_2359
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR018060:IPR005467:IPR001789:IPR018062:IPR 004358:IPR011110:IPR011123:IPR003661:IPR003594:IPR000005; KEGG: sli:Slin_6436 histidine kinase; PFAM: ATP-binding region ATPase domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; histidine kinase A domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; [...]
 
 
0.974
Lbys_2531
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR018060:IPR005467:IPR001789:IPR004358:IPR 011110:IPR011123:IPR003661:IPR003594:IPR000005; KEGG: sli:Slin_6436 histidine kinase; PFAM: ATP-binding region ATPase domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; histidine kinase A domain protein; response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Helix-turn [...]
 
 
0.969
Lbys_1866
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR011110:IPR011123:IPR003661:IPR003594:IPR 001789:IPR000005:IPR004358:IPR018060:IPR018062:IPR005829:I PR005467; KEGG: phe:Phep_0783 ATP-binding region ATPase domain protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; histidine kinase A domain protein; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; ATP-binding region ATPase domain protein; [...]
 
 
0.968
Lbys_2945
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR011110:IPR011123:IPR003661:IPR003594:IPR 001789:IPR000005:IPR004358:IPR018060:IPR005467:IPR018062:I PR005829; KEGG: cpi:Cpin_5544 histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator three Y domain-containing protein; Two component regulator propeller; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domai [...]
 
 
0.968
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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