STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_0720GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: vvu:VV1_2448 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Probable acetyltransferase; PFAM: Acetyltransferase (GNAT) family. (141 aa)    
Predicted Functional Partners:
Lbys_0719
OsmC family protein; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: sli:Slin_0548 OsmC family protein; PFAM: OsmC family protein; SPTR: OsmC-like protein; PFAM: OsmC-like protein.
       0.773
Lbys_0426
Methyltransferase type 11; COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR013216; KEGG: str:Sterm_0996 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase; PFAM: Methyltransferase domain.
  
     0.422
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.