STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_0934COGs: COG1225 Peroxiredoxin; InterPro IPR017936:IPR017937:IPR019825:IPR000866; KEGG: fjo:Fjoh_3991 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thiol:disulfide interchange protein; PFAM: AhpC/TSA family. (329 aa)    
Predicted Functional Partners:
Lbys_1985
InterPro IPR000866:IPR017936; KEGG: phe:Phep_0951 redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein; PFAM: AhpC/TSA family.
 
     0.617
Lbys_0933
Peptidase M61 domain protein; COGs: COG3975 protease with the C-terminal PDZ domain; InterPro IPR001478:IPR007963; KEGG: sli:Slin_2037 peptidase M61 domain protein; PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase M61 domain protein; PFAM: M61 glycyl aminopeptidase.
       0.500
Lbys_2596
Peptidase M14 carboxypeptidase A; InterPro IPR000834; KEGG: rbi:RB2501_13074 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: Putative uncharacterized protein; PFAM: Zinc carboxypeptidase.
 
      0.465
Lbys_2897
Redoxin domain protein; InterPro IPR013740:IPR017936; KEGG: dfe:Dfer_3524 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin domain protein; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: Redoxin.
  
     0.420
Lbys_2190
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
    0.405
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.