STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_0937parB-like partition protein; COGs: COG1475 transcriptional regulator protein; InterPro IPR004437:IPR003115; KEGG: sli:Slin_0242 ParB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; Belongs to the ParB family. (288 aa)    
Predicted Functional Partners:
Lbys_0938
Hypothetical protein; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: fba:FIC_00750 ParA-like ATPase; SPTR: ParA-like ATPase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 
 0.976
Lbys_2072
COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: dfe:Dfer_0206 cobyrinic acid ac-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 0.945
Lbys_2108
Cobyrinic acid ac-diamide synthase; COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: dfe:Dfer_0206 cobyrinic acid ac-diamide synthase; SPTR: SpoOJ regulator protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
 
 0.914
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
     
 0.827
Lbys_0936
KEGG: bth:BT_4000 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.812
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.
  
  
 0.798
Lbys_2823
Cell division protein FtsK/SpoIIIE; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541; KEGG: sli:Slin_5855 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SPTR: Cell divisionFtsK/SpoIIIE; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family.
  
  
 0.746
Lbys_0939
RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.580
Lbys_0173
COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: fjo:Fjoh_3016 chromosome partitioning ATPase; SPTR: Protein found in conjugate transposon; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
  
 
 0.554
Lbys_1875
KEGG: sli:Slin_3992 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.554
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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