close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_0987KEGG: fba:FIC_01981 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF937). (216 aa)    
Predicted Functional Partners:
Lbys_0988
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; COGs: COG3871 Uncharacterized stress protein (general stress protein 26); InterPro IPR011576; KEGG: gfo:GFO_0277 uncharacterized stress protein (general stress protein 26); PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Uncharacterized stress protein (General stress protein 26); PFAM: Pyridoxamine 5'-phosphate oxidase.
 
     0.628
Lbys_0986
Hypothetical protein; KEGG: sag:SAG1103 6-phospho-beta-glucosidase; SPTR: 6-phospho-beta-glucosidase.
       0.605
Lbys_3432
KEGG: fjo:Fjoh_2789 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.497
Lbys_1251
Protein of unknown function DUF81; InterPro IPR002781; KEGG: pat:Patl_2981 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Integral membrane protein; PFAM: Sulfite exporter TauE/SafE.
  
     0.495
Lbys_1712
KEGG: sli:Slin_1460 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.461
Lbys_3499
Restriction endonuclease; InterPro IPR005144:IPR007560; KEGG: zpr:ZPR_3407 putative nuclease; PFAM: restriction endonuclease; SPTR: Putative uncharacterized protein; PFAM: Restriction endonuclease.
  
     0.439
Lbys_1514
KEGG: gfo:GFO_0237 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.412
Lbys_0041
KEGG: fjo:Fjoh_2151 hypothetical protein; SPTR: Hypothetical lipoprotein.
  
     0.403
Lbys_0989
InterPro IPR002514; KEGG: paa:Paes_2107 transposase IS3/IS911 family protein; PFAM: transposase IS3/IS911 family protein; SPTR: Transposase IS3/IS911 family protein; PFAM: Transposase.
       0.402
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.