STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_0992Hypothetical protein; KEGG: sli:Slin_5064 conserved repeat domain protein; SPTR: Putative uncharacterized protein; PFAM: Pregnancy-associated plasma protein-A. (495 aa)    
Predicted Functional Partners:
Lbys_0993
Hypothetical protein; KEGG: sdn:Sden_2517 putative sulfate transport protein CysZ; SPTR: Soluble acid invertase 1.
       0.718
Lbys_2542
LytTr DNA-binding region; InterPro IPR007492; KEGG: dfe:Dfer_1502 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; SPTR: Two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding domain.
  
     0.512
Lbys_1275
LytTr DNA-binding region; InterPro IPR007492; KEGG: sli:Slin_3848 response regulator receiver protein; PFAM: LytTr DNA-binding region; SPTR: Response regulator; PFAM: LytTr DNA-binding domain.
  
     0.475
Lbys_0991
KEGG: dfe:Dfer_2363 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.433
Lbys_0041
KEGG: fjo:Fjoh_2151 hypothetical protein; SPTR: Hypothetical lipoprotein.
  
     0.421
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
Server load: medium (54%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.