STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_1342Hypothetical protein; KEGG: pmg:P9301_10901 aminopeptidase N; SPTR: Probable aminopeptidase N. (294 aa)    
Predicted Functional Partners:
Lbys_1343
Hypothetical protein; KEGG: pvx:PVX_114990 guanylyl cyclase; SPTR: Guanylyl cyclase, putative.
       0.498
Lbys_1344
Hypothetical protein; KEGG: pmj:P9211_00581 bacteriocin/lantibiotic ABC transporter; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase.
       0.498
Lbys_1345
KEGG: dfe:Dfer_5228 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.498
Lbys_1346
KEGG: dfe:Dfer_5229 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.498
Lbys_1340
Domain of unknown function DUF1814; InterPro IPR014942; KEGG: fjo:Fjoh_3621 hypothetical protein; PFAM: Domain of unknown function DUF1814; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1814).
       0.496
Lbys_1341
KEGG: fjo:Fjoh_3622 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.496
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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