STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_1490KEGG: fjo:Fjoh_1082 hypothetical protein; SPTR: Putative uncharacterized protein. (190 aa)    
Predicted Functional Partners:
Lbys_1486
KEGG: rbi:RB2501_08140 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
Lbys_1487
Inosine guanosine and xanthosine phosphorylase family; COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR000845:IPR011268; KEGG: sli:Slin_3943 purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; SPTR: Purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family.
       0.773
Lbys_1488
KEGG: fps:FP2258 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
Lbys_1489
InterPro IPR013114; KEGG: fjo:Fjoh_1081 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase, FabA/FabZ; PFAM: FabA-like domain.
       0.773
Lbys_1491
KEGG: fjo:Fjoh_1082 hypothetical protein; SPTR: Putative uncharacterized protein.
      
0.773
Lbys_1492
InterPro IPR004564; KEGG: fps:FP2262 hypothetical protein; PFAM: outer membrane lipoprotein carrier protein LolA; SPTR: Putative uncharacterized protein; PFAM: Outer membrane lipoprotein carrier protein LolA.
  
    0.665
Lbys_1496
Acyl-carrier protein-like protein; InterPro IPR009081:IPR006162; KEGG: cat:CA2559_03870 acyl-carrier protein-like protein; SPTR: Acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein.
  
    0.665
Lbys_1493
COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: fjo:Fjoh_1086 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Candidate polysaccharide deacetylase; Carbohydrate esterase family 4; PFAM: Polysaccharide deacetylase.
       0.661
Lbys_1494
Beta-ketoacyl synthase; InterPro IPR014030; KEGG: fps:FP2264 3-oxoacyl-(acyl-carrier-protein) synthase; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.661
Lbys_1495
Beta-ketoacyl synthase; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030:IPR014031:IPR018201; KEGG: fjo:Fjoh_1088 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; SPTR: Beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.661
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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