STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_1985InterPro IPR000866:IPR017936; KEGG: phe:Phep_0951 redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein; PFAM: AhpC/TSA family. (439 aa)    
Predicted Functional Partners:
Lbys_1986
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: phe:Phep_0950 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
     0.895
Lbys_1987
KEGG: cpi:Cpin_2265 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.860
Lbys_0593
Redoxin domain protein; InterPro IPR017936:IPR013740; KEGG: sli:Slin_1863 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin.
  
     0.755
Lbys_3319
COGs: COG0450 Peroxiredoxin; InterPro IPR017936:IPR000866:IPR019479; KEGG: dfe:Dfer_5194 peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; PRIAM: Peroxidase; SPTR: Peroxidase; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family.
  
 0.729
Lbys_2953
Redoxin domain protein; COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013740:IPR017936; KEGG: cpi:Cpin_5421 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin domain protein; SPTR: Thioredoxin; PFAM: Redoxin.
  
     0.719
Lbys_0809
COGs: COG1225 Peroxiredoxin; InterPro IPR017936:IPR017937:IPR000866; KEGG: phe:Phep_0264 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thioredoxin family protein; PFAM: AhpC/TSA family.
 
     0.708
Lbys_0934
COGs: COG1225 Peroxiredoxin; InterPro IPR017936:IPR017937:IPR019825:IPR000866; KEGG: fjo:Fjoh_3991 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thiol:disulfide interchange protein; PFAM: AhpC/TSA family.
 
     0.617
Lbys_1438
COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782:IPR017936; KEGG: dfe:Dfer_5207 electron transport protein SCO1/SenC; PFAM: electron transport protein SCO1/SenC; SPTR: Electron transport protein SCO1/SenC; PFAM: SCO1/SenC.
  
 
 0.614
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.610
Lbys_2956
Protein-disulfide reductase; COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR017936; KEGG: dfe:Dfer_4173 cytochrome c biogenesis protein transmembrane region; PRIAM: Protein-disulfide reductase; SPTR: Cytochrome c biogenesis protein transmembrane region; PFAM: Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255.
  
 
 0.602
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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