STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_1989KEGG: phe:Phep_1806 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Methylamine utilisation protein MauE. (145 aa)    
Predicted Functional Partners:
Lbys_2442
KEGG: phe:Phep_0952 tetratricopeptide domain protein; SPTR: Tetratricopeptide domain protein; PFAM: SusD family.
  
     0.722
Lbys_1367
Hypothetical protein; InterPro IPR019734:IPR013026; KEGG: phe:Phep_1035 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
     0.702
Lbys_1987
KEGG: cpi:Cpin_2265 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
     0.702
Lbys_0213
Tetracycline regulation of excision, RteC; InterPro IPR018534; KEGG: fjo:Fjoh_4473 hypothetical protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: Regulatory protein; PFAM: RteC protein.
  
     0.694
Lbys_2441
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: phe:Phep_0950 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.643
Lbys_1986
TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: phe:Phep_0950 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.629
Lbys_1368
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: cpi:Cpin_2264 TonB-dependent receptor plug; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.593
Lbys_2322
RagB/SusD domain protein; InterPro IPR012944; KEGG: dfe:Dfer_0794 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
  
     0.555
Lbys_1349
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: dfe:Dfer_0967 helix-turn-helix domain protein; SPTR: Helix-turn-helix domain protein.
  
     0.551
Lbys_0496
KEGG: phe:Phep_4095 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.523
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.