STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_2008TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: bth:BT_2364 hypothetical protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (1054 aa)    
Predicted Functional Partners:
Lbys_2009
RagB/SusD domain-containing protein; InterPro IPR012944; KEGG: bfs:BF0595 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
 
   0.948
Lbys_0358
RagB/SusD domain protein; InterPro IPR012944; KEGG: dfe:Dfer_1849 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
 
   0.839
Lbys_3420
RagB/SusD domain protein; InterPro IPR012944; KEGG: phe:Phep_4138 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: Outer membrane protein; PFAM: SusD family.
  
 
   0.764
Lbys_0271
RagB/SusD domain protein; InterPro IPR012944; KEGG: pru:PRU_2696 putative lipoprotein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
 
   0.756
Lbys_1239
RagB/SusD domain protein; InterPro IPR012944; KEGG: cpi:Cpin_6565 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
 
     0.700
Lbys_0834
RagB/SusD domain protein; InterPro IPR012944; KEGG: bvu:BVU_0842 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
 
   0.690
Lbys_2270
RagB/SusD domain protein; InterPro IPR012944; KEGG: zpr:ZPR_2897 RagB/SusD family protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD family protein; PFAM: SusD family.
  
 
   0.600
Lbys_0487
RagB/SusD domain protein; InterPro IPR012944; KEGG: bfr:BF0671 hypothetical protein; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
 
   0.596
Lbys_2115
RagB/SusD domain protein; InterPro IPR012944; KEGG: sli:Slin_6450 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: SusD/RagB family protein; PFAM: SusD family.
 
 
   0.583
Lbys_2627
KEGG: srm:SRM_00331 conserved hypothetical protein, secreted; SPTR: Putative uncharacterized protein; PFAM: SusD family.
  
 
   0.573
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.