STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhaASodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family. (387 aa)    
Predicted Functional Partners:
Lbys_0165
InterPro IPR012424; KEGG: fjo:Fjoh_3002 TraJ family protein conjugative transposon; PFAM: TraJ family protein conjugative transposon; SPTR: TraJ family protein conjugative transposon; PFAM: Homologues of TraJ from Bacteroides conjugative transposon; TIGRFAM: Bacteroides conjugative transposon TraJ protein.
   
    0.760
Lbys_1634
COGs: COG4995 conserved hypothetical protein; KEGG: fjo:Fjoh_1271 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.760
Lbys_2137
Endonuclease/exonuclease/phosphatase; COGs: COG2374 extracellular nuclease; InterPro IPR005135; KEGG: npu:Npun_F1424 putative outer membrane adhesin like proteiin; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative outer membrane adhesin like proteiin; PFAM: Endonuclease/Exonuclease/phosphatase family.
       0.727
Lbys_2135
Integral membrane sensor signal transduction histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003661:IPR003594:IPR004358:IPR005467; KEGG: zpr:ZPR_1367 osmosensitive K+ channel signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Osmosensitive K+ channel signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
     
 0.566
Lbys_2134
Two component transcriptional regulator, winged helix family; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: zpr:ZPR_1366 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal.
       0.552
Lbys_2133
COGs: COG3158 K+ transporter; InterPro IPR003855; KEGG: dfe:Dfer_4676 K potassium transporter; PFAM: K potassium transporter; SPTR: K potassium transporter; PFAM: K+ potassium transporter.
     
 0.437
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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