STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_2175KEGG: chu:CHU_3070 hypothetical protein; SPTR: GTP-binding protein EngA; PFAM: SprT-like family. (213 aa)    
Predicted Functional Partners:
Lbys_2176
KEGG: sli:Slin_5949 hypothetical protein; SPTR: Fjo24; PFAM: Peptidase family C25.
       0.795
Lbys_2174
COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterProIPR006220:IPR011702:IPR001317:IPR006221:IPR 000991:IPR017926; KEGG: sli:Slin_5473 glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; SPTR: Glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase.
       0.773
Lbys_2173
COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR019999:IPR006805:IPR015890; KEGG: dfe:Dfer_3790 anthranilate synthase; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme.
       0.746
Lbys_1770
KEGG: dfe:Dfer_4253 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.655
Lbys_2177
KEGG: dfe:Dfer_4247 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.636
Lbys_2642
KEGG: sli:Slin_0266 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.588
Lbys_2033
KEGG: dfe:Dfer_3492 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3078).
  
     0.544
Lbys_2594
KEGG: dfe:Dfer_3789 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.496
Lbys_0889
KEGG: sli:Slin_2427 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.493
Lbys_3583
Gliding motility-associated protein GldC; InterPro IPR019854; KEGG: dfe:Dfer_0458 motility-like protein; SPTR: Motility-like protein; TIGRFAM: gliding motility-associated protein GldC; TIGRFAM: gliding motility-associated protein GldC.
  
     0.488
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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