STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_2441TonB-dependent receptor plug; InterPro IPR012910:IPR000531; KEGG: phe:Phep_0950 TonB-dependent receptor plug; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (1063 aa)    
Predicted Functional Partners:
Lbys_2442
KEGG: phe:Phep_0952 tetratricopeptide domain protein; SPTR: Tetratricopeptide domain protein; PFAM: SusD family.
     0.946
Lbys_2440
Redoxin domain protein; InterPro IPR017936:IPR013740; KEGG: phe:Phep_0951 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Thioredoxin; Protein of unknown function (DUF3738).
 
     0.917
Lbys_1367
Hypothetical protein; InterPro IPR019734:IPR013026; KEGG: phe:Phep_1035 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.775
Lbys_1987
KEGG: cpi:Cpin_2265 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
     0.775
Lbys_1365
KEGG: cpi:Cpin_3811 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Methylamine utilisation protein MauE.
  
     0.687
Lbys_2444
KEGG: phe:Phep_1806 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Methylamine utilisation protein MauE.
  
     0.654
Lbys_1989
KEGG: phe:Phep_1806 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Methylamine utilisation protein MauE.
  
     0.643
Lbys_2517
anti-FecI sigma factor, FecR; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: dfe:Dfer_0715 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; PFAM: FecR protein.
  
    0.613
Lbys_1369
Redoxin domain protein; InterPro IPR013740:IPR017936; KEGG: cpi:Cpin_3163 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin domain protein; SPTR: Possible thiol:disulfide interchange protein TlpA; PFAM: AhpC/TSA family.
  
     0.601
Lbys_1985
InterPro IPR000866:IPR017936; KEGG: phe:Phep_0951 redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein; PFAM: AhpC/TSA family.
  
     0.559
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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