STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lbys_3468Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510:IPR006311; KEGG: sli:Slin_1335 peptidase U62 modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Peptidase U62 modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase. (547 aa)    
Predicted Functional Partners:
Lbys_3469
Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: dfe:Dfer_2098 peptidase U62 modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Peptidase U62 modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase.
 
     0.953
Lbys_3471
Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: sli:Slin_1331 peptidase U62 modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Peptidase U62 modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase.
 
     0.903
Lbys_3476
KEGG: sli:Slin_1321 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.889
Lbys_3472
KEGG: sli:Slin_1325 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.884
Lbys_3474
Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: sli:Slin_1323 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58.
 
     0.812
Lbys_3475
InterPro IPR011933; KEGG: sli:Slin_1322 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
 
     0.763
Lbys_3470
Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510:IPR006311; KEGG: dfe:Dfer_2097 peptidase U62 modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Peptidase U62 modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase.
 
    
0.575
Lbys_3477
KEGG: dfe:Dfer_2090 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.529
Lbys_3473
COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR016366; KEGG: sli:Slin_1324 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA).
       0.504
Lbys_3467
KEGG: vpo:Kpol_541p23 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.499
Your Current Organism:
Leadbetterella byssophila
NCBI taxonomy Id: 649349
Other names: L. byssophila DSM 17132, Leadbetterella byssophila 4M15, Leadbetterella byssophila DSM 17132, Leadbetterella byssophila str. DSM 17132, Leadbetterella byssophila strain DSM 17132
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