STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
Trad_0212Alcohol dehydrogenase zinc-binding domain protein; COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterProIPR013154:IPR013149:IPR011032:IPR016040:IPR 002328; KEGG: ddr:Deide_03550 putative alcohol dehydrogenase, (ADH); PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: C1CZS5 Putative Alcohol dehydrogenase, (ADH); PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase. (342 aa)    
Predicted Functional Partners:
Trad_1539
Alcohol dehydrogenase GroES domain protein; COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterProIPR002328:IPR013154:IPR013149:IPR011032:IPR 016040; KEGG: rme:Rmet_1093 alcohol dehydrogenase GroES-like protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: Q1LPE7 Alcohol dehydrogenase GroES-like protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
  
  
 
0.914
Trad_1794
Zinc-binding alcohol dehydrogenase family protein; COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterPro IPR013154:IPR011032:IPR016040:IPR014187; KEGG: tro:trd_0582 NAD-dependent alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; SPTR: B9KYN5 NAD-dependent alcohol dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: zinc-binding alcohol dehydrogenase family protein.
  
  
 
0.910
Trad_0840
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterProIPR011408:IPR016160:IPR015590:IPR016162:IPR 016161; KEGG: gau:GAU_2061 putative aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: C1A9C6 Putative aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
 
 0.909
Trad_1538
COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160:IPR015590:IPR016162:IPR016161; KEGG: xac:XAC0129 chloroacetaldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: A6CTM5 NAD-dependent aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; Belongs to the aldehyde dehydrogenase family.
  
 
 0.909
Trad_1917
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.478
Trad_0210
Transketolase central region; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475:IPR005476:IPR009014:IPR015941; KEGG: ttj:TTHA0938 pyruvate dehydrogenase E1 component, beta subunit; PFAM: Transketolase central region; Transketolase domain protein; SPTR: C1XT03 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
     
 0.411
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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