STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_0234Thioesterase superfamily protein; COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: sde:Sde_1856 hypothetical protein; PFAM: thioesterase superfamily protein; SPTR: Q21JL3 Thioesterase superfamily; PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051. (133 aa)    
Predicted Functional Partners:
Trad_0386
COGs: COG2902 NAD-specific glutamate dehydrogenase; InterPro IPR020539:IPR007780:IPR016040; KEGG: rxy:Rxyl_2529 glutamate dehydrogenase (NAD); PFAM: NAD-glutamate dehydrogenase; SPTR: Q1AT32 Glutamate dehydrogenase (NAD); PFAM: Bacterial NAD-glutamate dehydrogenase.
 
    0.507
Trad_2792
COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterProIPR004410:IPR001227:IPR014043:IPR016035:IPR 016036; KEGG: ttj:TTHA0416 malonyl CoA-[acyl carrier protein] transacylase; PFAM: Acyl transferase; SPTR: C1XP82 (Acyl-carrier-protein) S-malonyltransferase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.
  
 
 0.498
Trad_0233
Thioesterase superfamily protein; COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: rpi:Rpic_3629 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: B2U748 Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: conserved hypothetical protein TIGR00051.
 
    
0.450
Trad_1406
COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR018376:IPR001753:IPR006176:IPR006108:IPR 016040:IPR013328:IPR008927; KEGG: dge:Dgeo_0754 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: Q1J0C8 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.409
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.400
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.