STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_0423Plasmid stabilization system; InterPro IPR007712; KEGG: mar:MAE_07940 hypothetical protein; PFAM: plasmid stabilization system; SPTR: Q4C7V8 Plasmid stabilization system; PFAM: Plasmid stabilisation system protein. (102 aa)    
Predicted Functional Partners:
Trad_0422
Hypothetical protein; KEGG: ate:Athe_2026 integrase family protein; SPTR: Q855R3 Gp50.
     
 0.774
Trad_0424
Transcriptional regulator, XRE family; InterPro IPR001387; KEGG: dge:Dgeo_2718 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Q1J2Y3 XRE-family like protein, component of toxin-antitoxin system; PFAM: Helix-turn-helix.
       0.773
Trad_0425
Hypothetical protein; KEGG: cyh:Cyan8802_3582 cell envelope-related transcriptional attenuator; SPTR: C7QM94 Cell envelope-related transcriptional attenuator.
       0.475
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.