STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_0442COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: dge:Dgeo_1274 diacylglycerol kinase; PFAM: diacylglycerol kinase; SPTR: Q1IYW4 Diacylglycerol kinase; PFAM: Prokaryotic diacylglycerol kinase. (103 aa)    
Predicted Functional Partners:
ybeY
Protein of unknown function UPF0054; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.951
Trad_0441
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.801
Trad_0444
Metal dependent phosphohydrolase; COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR006674:IPR006675:IPR003607; KEGG: aac:Aaci_1984 7TM receptor with intracellular metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: C8WY34 7TM receptor with intracellular metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG.
 
    0.769
Trad_0445
PhoH family protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: tth:TTC0684 PhoH protein; PFAM: PhoH family protein; SPTR: C1XJH1 Phosphate starvation-inducible protein PhoH, predicted ATPase; manually curated; PFAM: PhoH-like protein.
  
  
 0.646
Trad_0440
Tetratricopeptide TPR_2 repeat protein; InterProIPR013105:IPR001440:IPR019734:IPR013026:IPR 011990; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SPTR: B7K3M3 TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
       0.490
Trad_0447
Band 7 protein; COGs: COG4864 conserved hypothetical protein; InterPro IPR001107; KEGG: ttj:TTHA1048 hypothetical protein; PFAM: band 7 protein; SPTR: Q72JT2 UPF0365 protein TT_C0686; PFAM: SigmaW regulon antibacterial.
       0.445
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.423
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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