STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_0530Disulfide bond formation protein DsbB; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily. (155 aa)    
Predicted Functional Partners:
Trad_0531
DSBA oxidoreductase; COGs: COG1651 Protein-disulfide isomerase; InterPro IPR001853:IPR012336:IPR012335; KEGG: dge:Dgeo_0692 DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: Q1J0J0 DSBA oxidoreductase; PFAM: DSBA-like thioredoxin domain.
 
 
 0.944
Trad_2681
Carboxypeptidase Taq; COGs: COG2317 Zn-dependent carboxypeptidase; InterProIPR017936:IPR001333:IPR001853:IPR012335:IPR 012336; KEGG: rxy:Rxyl_1098 carboxypeptidase; PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; DSBA oxidoreductase; PRIAM: Carboxypeptidase Taq; SPTR: Q1AX14 Carboxypeptidase Taq. Metallo peptidase. MEROPS family M32; PFAM: Carboxypeptidase Taq (M32) metallopeptidase; DSBA-like thioredoxin domain.
  
 
 0.582
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.510
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
     
 0.420
Trad_0532
InterPro IPR017969:IPR006121; KEGG: dra:DR_2452 hypothetical protein; PFAM: Heavy metal transport/detoxification protein; SPTR: B7A607 Heavy metal transport/detoxification protein; PFAM: Heavy-metal-associated domain.
       0.413
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.