STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_0940Luciferase-like, subgroup; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR011251:IPR016048; KEGG: rmr:Rmar_2381 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: D0MEN1 Luciferase-like monooxygenase; PFAM: Luciferase-like monooxygenase. (401 aa)    
Predicted Functional Partners:
Trad_1134
Glyoxalase/bleomycin resistance protein/dioxygenase; COGs: COG2514 ring-cleavage extradiol dioxygenase; InterPro IPR004360; KEGG: gau:GAU_2905 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: C1ABS0 Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
  
  
 0.665
Trad_0938
COGs: COG5573 nucleic-acid-binding protein contains PIN domain; KEGG: gbr:Gbro_2961 PilT protein domain protein; SPTR: D0LA04 PilT protein domain protein; PFAM: PIN domain.
       0.544
Trad_0939
KEGG: pth:PTH_2282 hypothetical protein; SPTR: A5CZV8 Putative uncharacterized protein.
       0.544
Trad_2254
NMT1/THI5 like domain protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR015168; KEGG: ttr:Tter_1222 NMT1/THI5 like domain protein; PFAM: NMT1/THI5 like domain protein; SPTR: D1CBG5 NMT1/THI5 like domain protein; PFAM: NMT1/THI5 like.
 
  
 0.419
Trad_2651
Glyoxalase/bleomycin resistance protein/dioxygenase; COGs: COG0346 Lactoylglutathione lyase and related lyase; InterPro IPR004360; KEGG: hau:Haur_2686 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: A9B146 Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
 
  
 0.411
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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