STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_0974ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439:IPR018170; KEGG: dat:HRM2_33790 ABC-type branched-chain amino acid transport system, permease component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0QMD7 ABC-type branched-chain amino acid transport system, permease component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter. (290 aa)    
Predicted Functional Partners:
Trad_0573
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: vap:Vapar_4939 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: C5CP79 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.997
Trad_0973
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: kol:Kole_1104 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: C5CI27 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.997
Trad_2358
Inner-membrane translocator; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ttj:TTHA0450 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Q5SL43 Branched-chain amino acid ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.997
Trad_0972
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: btr:Btr_1147 permease protein of ABC transporter; PFAM: inner-membrane translocator; SPTR: A9IU69 Permease protein of ABC transporter; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.996
Trad_2359
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tth:TTC0080 branched-chain amino acid transport system permease protein LivH; PFAM: inner-membrane translocator; SPTR: C1XUL9 Branched-chain amino acid ABC-type transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.981
Trad_0572
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dol:Dole_3010 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: A8ZZ40 Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.979
Trad_1885
Inner-membrane translocator; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tth:TTC0598 branched-chain amino acid transport system permease protein LivH; PFAM: inner-membrane translocator; SPTR: C1XFE8 Branched-chain amino acid ABC-type transport system, permease component; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.977
Trad_0971
Extracellular ligand-binding receptor; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: dba:Dbac_0611 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: C7LX62 Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region.
 
  
 0.935
Trad_0975
ABC transporter related protein; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439:IPR017871; KEGG: dat:HRM2_33780 ABC-type branched-chain amino acid transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C0QMD6 ABC-type branched-chain amino acid transport system, ATPase component; PFAM: ABC transporter.
 
  
0.927
Trad_1884
ABC transporter related protein; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593:IPR003439:IPR001851; KEGG: tth:TTC0599 branched-chain amino acid transport system permease protein LivM/branched-chain amino acid transport ATP-binding protein LivG; PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; SPTR: C1XPX6 ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; Branched-chain amino acid transport system [...]
 
 
0.912
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.