STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_1023Conserved hypothetical protein; InterPro IPR009056; KEGG: aba:Acid345_3000 hypothetical protein; SPTR: B9XE55 Putative uncharacterized protein; PFAM: Cytochrome c. (211 aa)    
Predicted Functional Partners:
Trad_1024
KEGG: rrs:RoseRS_4142 hypothetical protein; SPTR: A5V0T3 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3341).
  
 0.995
Trad_1026
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311:IPR017896:IPR009010; KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit; SPTR: Q3JBQ7 Molybdopterin oxidoreductase, iron-sulfur binding subunit.
 
  
 0.965
Trad_1025
COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: cag:Cagg_3385 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: B8G8V4 Polysulphide reductase NrfD; PFAM: Polysulphide reductase, NrfD.
 
   
 0.951
Trad_1022
KEGG: sus:Acid_0494 hypothetical protein; SPTR: Q02BR2 Putative uncharacterized protein.
 
    0.950
Trad_1027
Conserved hypothetical protein; InterPro IPR000095:IPR011031; KEGG: rrs:RoseRS_4139 hypothetical protein; SPTR: A5V0T0 Putative uncharacterized protein; PFAM: Class III cytochrome C family.
 
   
 0.927
Trad_1021
Cytochrome c class I; InterPro IPR009056:IPR003088; KEGG: ttj:TTHA1423 cytochrome c-552 precursor; PFAM: cytochrome c class I; SPTR: Q1J072 Cytochrome c, class I; PFAM: Cytochrome c.
       0.773
Trad_1495
COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR002429:IPR009056:IPR003088:IPR008972; KEGG: rmr:Rmar_1565 cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; SPTR: D0MIZ4 Cytochrome c oxidase subunit II; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c.
 
  
 0.597
Trad_2780
Cytochrome oxidase assembly; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: mxa:MXAN_0602 cytochrome oxidase assembly protein; PFAM: cytochrome oxidase assembly; SPTR: Q1DEQ3 Cytochrome oxidase assembly protein; PFAM: Cytochrome oxidase assembly protein.
 
     0.575
Trad_2778
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
  
 0.557
Trad_0135
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099:IPR016156:IPR016040; KEGG: ttj:TTHA1835 NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Q5SH95 NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
   
 
 0.542
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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