STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_1298KEGG: rbi:RB2501_01730 hypothetical protein; SPTR: A3HW62 Putative uncharacterized protein. (367 aa)    
Predicted Functional Partners:
Trad_2946
KEGG: cpi:Cpin_1044 hypothetical protein; SPTR: C7PMJ8 Putative uncharacterized protein; TIGRFAM: gliding motility-associated protein GldC.
 
     0.729
Trad_2159
KEGG: cpi:Cpin_2624 metallophosphoesterase; SPTR: C7PJ22 Metallophosphoesterase.
 
     0.702
Trad_1299
COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871:IPR003439:IPR003593; KEGG: dge:Dgeo_0506 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q1J126 ATPase component of ABC transporter, containing duplicated ATPase domains; PFAM: ABC transporter.
       0.603
Trad_1357
phospholipase/Carboxylesterase; COGs: COG0400 esterase; InterPro IPR003140; KEGG: cpc:Cpar_0347 phospholipase/carboxylesterase; PFAM: phospholipase/Carboxylesterase; SPTR: B3QKY3 Phospholipase/Carboxylesterase; PFAM: Phospholipase/Carboxylesterase.
  
     0.401
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.