STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_1324InterPro IPR000276; KEGG: gvi:glr3422 hypothetical protein; SPTR: Q7NFV2 Glr3422 protein. (504 aa)    
Predicted Functional Partners:
Trad_1323
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: gvi:glr3421 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Q7NFV3 Glr3421 protein; PFAM: ABC transporter.
  
    0.825
Trad_1325
Methyltransferase type 12; InterPro IPR013217; KEGG: xce:Xcel_2365 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: D1BVR2 Putative uncharacterized protein; PFAM: Methyltransferase small domain.
     
 0.615
Trad_1321
InterPro IPR000994; KEGG: chl:Chy400_0110 Xaa-Pro aminopeptidase family enzyme; SPTR: B9LGG4 Xaa-Pro aminopeptidase family enzyme; PFAM: Metallopeptidase family M24.
  
    0.542
Trad_1322
Endoribonuclease L-PSP; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395:IPR006175:IPR013813; KEGG: dsh:Dshi_1985 aldo/keto reductase family protein; PFAM: Endoribonuclease L-PSP; aldo/keto reductase; SPTR: A4A767 Aldo/keto reductase/Endoribonuclease L-PSP; PFAM: Aldo/keto reductase family; Endoribonuclease L-PSP.
       0.542
Trad_1320
COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563:IPR012349:IPR009002; KEGG: ddr:Deide_1p00510 putative flavoredoxin; PFAM: flavin reductase domain protein FMN-binding; SPTR: C1D215 Putative flavoredoxin; PFAM: Flavin reductase like domain.
       0.528
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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