STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_1386SagB-type dehydrogenase domain protein; InterPro IPR020051:IPR000415; KEGG: ttj:TTHA0021 putative NADPH oxidoreductase; SPTR: Q72G71 Glucose-1-phosphate adenylyltransferase; TIGRFAM: SagB-type dehydrogenase domain; PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain. (238 aa)    
Predicted Functional Partners:
Trad_1387
AIG2 family protein; COGs: COG2105 conserved hypothetical protein; InterPro IPR009288:IPR013024; KEGG: dge:Dgeo_2184 hypothetical protein; PFAM: AIG2 family protein; SPTR: Q1IWA6 Putative uncharacterized protein; PFAM: AIG2-like family.
 
     0.725
Trad_1385
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.493
leuC
Homoaconitate hydratase family protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
     0.469
leuD
3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
 
     0.453
Trad_2617
Xylose isomerase domain protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR001719:IPR013022; KEGG: ttj:TTHA1934 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; SPTR: Q5SGZ6 Putative uncharacterized protein TTHA1934; PFAM: Xylose isomerase-like TIM barrel.
  
     0.443
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.