STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_1406COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR018376:IPR001753:IPR006176:IPR006108:IPR 016040:IPR013328:IPR008927; KEGG: dge:Dgeo_0754 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: Q1J0C8 3-hydroxyacyl-CoA dehydrogenase, NAD-binding; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family. (693 aa)    
Predicted Functional Partners:
Trad_0654
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: ddr:Deide_17090 putative beta-ketoadipyl CoA thiolase; PRIAM: 3-oxoadipyl-CoA thiolase; SPTR: Q1IYT3 Acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
Trad_1984
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016039:IPR016038; KEGG: scl:sce7105 putative beta-ketoadipyl CoA thiolase; SPTR: B9Z576 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
Trad_2739
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR016038:IPR000408:IPR016039:IPR002155; KEGG: rxy:Rxyl_2454 3-ketoacyl-CoA thiolase; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: Q1AT97 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
 0.999
Trad_2771
COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR016038:IPR016039; KEGG: chl:Chy400_3476 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: B9LCI5 Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.999
Trad_0614
acetoacetyl-CoA synthase; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR005914:IPR020845:IPR000873; KEGG: aeh:Mlg_2108 acetoacetyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: Q0A6T7 Acetoacetyl-CoA synthase; TIGRFAM: acetoacetyl-CoA synthase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetoacetyl-CoA synthase.
  
 0.966
Trad_2740
COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR001753:IPR006176:IPR006108:IPR016040:IPR 013328:IPR018376:IPR008927; KEGG: rxy:Rxyl_2453 short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: Q1AT98 Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoy [...]
 
0.965
Trad_1691
COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376:IPR001753; KEGG: ttj:TTHA1434 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Q5SIE0 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family.
 
0.933
Trad_1690
COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterProIPR006180:IPR006176:IPR006108:IPR016040:IPR 013328:IPR008927; KEGG: mpt:Mpe_A0900 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; SPTR: A2SE73 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
0.932
Trad_0057
COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006092:IPR006091:IPR006090:IPR009100:IPR 009075:IPR013786:IPR013764:IPR006089; KEGG: tth:TTC0435 glutaryl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: Q72KT2 Glutaryl-CoA dehydrogenase; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
 
 0.909
Trad_0848
COGs: COG1960 Acyl-CoA dehydrogenase; InterProIPR006091:IPR006090:IPR013786:IPR013764:IPR 009100:IPR009075; KEGG: rrs:RoseRS_0478 acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain protein; SPTR: A5UQK0 Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain.
  
 0.909
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.