STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_1520CHAD domain containing protein; InterPro IPR007899; KEGG: psa:PST_2970 hypothetical protein; PFAM: CHAD domain containing protein; SPTR: A4VNR5 Putative uncharacterized protein; PFAM: CHAD domain. (312 aa)    
Predicted Functional Partners:
Trad_1519
KEGG: hypothetical protein; SPTR: A9VAP9 Predicted protein.
       0.773
Trad_1518
KEGG: chl:Chy400_3594 hypothetical protein; SPTR: B9LD75 Putative uncharacterized protein.
       0.463
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.