STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mraZMraZ protein; COGs: COG2001 conserved hypothetical protein; InterPro IPR020603:IPR003444; KEGG: ddr:Deide_08661 putative MraZ protein; PFAM: MraZ domain; SPTR: C1D1L7 Protein mraZ; TIGRFAM: MraZ protein; PFAM: MraZ protein; TIGRFAM: mraZ protein; Belongs to the MraZ family. (142 aa)    
Predicted Functional Partners:
rsmH
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
 0.994
Trad_1601
Peptidoglycan glycosyltransferase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460:IPR012338:IPR005311; KEGG: ddr:Deide_08690 putative peptidoglycan glycosyltransferase, precursor; PFAM: penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: C1D1M0 Putative Peptidoglycan glycosyltransferase,; PFAM: Penicillin binding protein transpeptidase domain.
 
  
 0.913
Trad_1600
KEGG: ttj:TTHA1077 hypothetical protein; SPTR: C1XIY3 Putative uncharacterized protein.
       0.773
Trad_1602
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein.
   
 
 0.767
murC
UDP-N-acetylmuramate/alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.752
murD
UDP-N-acetylmuramoylalanine/D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.
 
   
 0.749
Trad_1605
Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: tth:TTC0718 cell cycle protein FtsW; PFAM: cell cycle protein; SPTR: Q72JQ0 Cell division protein, ftsW/rodA/spove family; PFAM: Cell cycle protein; Belongs to the SEDS family.
  
  
 0.718
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
     
 0.715
Trad_1609
Polypeptide-transport-associated domain protein FtsQ-type; COGs: COG1589 Cell division septal protein; InterPro IPR013685; KEGG: dge:Dgeo_1633 cell division protein FtsQ; PFAM: Polypeptide-transport-associated domain protein FtsQ-type; SPTR: Q1IXV6 Cell division protein FtsQ; PFAM: POTRA domain, FtsQ-type.
     
 0.715
ftsA
Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.
 
  
 0.711
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.