STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_2605Von Willebrand factor type A; InterPro IPR002035:IPR010768; KEGG: rba:RB7503 putative chloride channel; PFAM: von Willebrand factor type A; protein of unknown function DUF1355; SMART: von Willebrand factor type A; SPTR: C1XFI8 Mg-chelatase subunit ChlD; PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355). (802 aa)    
Predicted Functional Partners:
Trad_0033
InterPro IPR011933; KEGG: rca:Rcas_1973 hypothetical protein; SPTR: A7NKP1 Conserved hypothetical membrane protein; TIGRFAM: conserved hypothetical protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain.
    0.819
Trad_0601
Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: chl:Chy400_3672 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: B9LDS3 Putative uncharacterized protein; PFAM: Protein of unknown function DUF58.
 
     0.759
Trad_2606
Histidine kinase; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR005467:IPR003661:IPR003594:IPR004358:IPR 009082; KEGG: dge:Dgeo_0908 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Q1IZX4 Sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
       0.502
Trad_0600
ATPase associated with various cellular activities AAA_3; COGs: COG0714 MoxR-like ATPase; InterPro IPR011703:IPR016366:IPR003593; KEGG: rca:Rcas_3818 ATPase; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: A7NQL0 ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA).
 
    0.440
Trad_0230
InterPro IPR011701:IPR016196; KEGG: mxa:MXAN_3677 major facilitator family transporter; PFAM: major facilitator superfamily MFS_1; SPTR: C1XFT0 Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
     0.431
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.