STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menCO-succinylbenzoic acid (OSB) synthetase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (367 aa)    
Predicted Functional Partners:
Trad_2124
GCN5-related N-acetyltransferase; COGs: COG3375 conserved hypothetical protein; InterPro IPR016181:IPR000182; KEGG: oan:Oant_4362 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: A6X758 Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.
     0.933
Trad_2718
Peptidase M20; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650:IPR017150; KEGG: sti:Sthe_1638 peptidase dimerization domain protein; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: D1C4A5 Peptidase dimerization domain protein; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain.
   
 0.904
Trad_2645
MazG nucleotide pyrophosphohydrolase; InterPro IPR004518:IPR011379; KEGG: pma:Pro0924 MazG family pyrophosphatase; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: C1XR25 MazG nucleotide pyrophosphohydrolase family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain.
 
     0.675
Trad_2647
Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; COGs: COG4188 dienelactone hydrolase; InterPro IPR005065; KEGG: dge:Dgeo_1926 dienelactone hydrolase-like protein; PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; SPTR: Q1IX13 Dienelactone hydrolase-like protein; PFAM: isoform II.
       0.590
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.