STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trad_2882Hypothetical protein; InterPro IPR019825:IPR011042:IPR011041; KEGG: dge:Dgeo_2672 glycosy hydrolase family protein; SPTR: Q1J329 Glycosyl hydrolase family 98, carbohydrate binding module. (693 aa)    
Predicted Functional Partners:
Trad_1254
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: dge:Dgeo_2670 glycosy hydrolase family protein; PFAM: protein of unknown function DUF1080; SPTR: Q1J331 Glycosyl hydrolase family 98, putative carbohydrate binding module; PFAM: Domain of Unknown Function (DUF1080).
    0.954
Trad_1805
KEGG: gvi:gll0047 hypothetical protein; SPTR: Q7NPK8 Gll0047 protein.
 
      0.899
Trad_2883
KEGG: gvi:gll0046 hypothetical protein; SPTR: Q7NPK9 Gll0046 protein.
 
    
0.791
Trad_1251
Kelch repeat-containing protein; COGs: COG3055 conserved hypothetical protein; InterPro IPR006652:IPR015915:IPR011043; KEGG: dge:Dgeo_2665 glycosy hydrolase family protein; PFAM: Kelch repeat-containing protein; SMART: Kelch repeat-containing protein; SPTR: Q1J336 Glycosyl hydrolase family 98, putative carbohydrate binding module; PFAM: Kelch motif.
     0.754
Trad_0891
InterPro IPR000537; KEGG: dge:Dgeo_2470 UbiA prenyltransferase; PFAM: UbiA prenyltransferase; SPTR: Q1J3N0 UbiA prenyltransferase; PFAM: UbiA prenyltransferase family.
 
     0.731
Trad_0892
Type I phosphodiesterase/nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591:IPR017849:IPR017850; KEGG: dge:Dgeo_2469 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Q1J3N1 Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase.
 
     0.720
Trad_1875
TatD-related deoxyribonuclease; COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR012022:IPR001130; KEGG: dge:Dgeo_2472 TatD-related deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; SPTR: Q1J3M8 TatD-related deoxyribonuclease; PFAM: TatD related DNase.
 
     0.717
Trad_1877
InterPro IPR012307; KEGG: dge:Dgeo_2471 hypothetical protein; PFAM: Xylose isomerase domain protein TIM barrel; SPTR: Q1J3M9 Sugar phosphate isomerase family enzyme.
 
    0.710
Trad_0896
Kelch repeat-containing protein; InterPro IPR006652:IPR015915:IPR011043; KEGG: dge:Dgeo_2670 glycosy hydrolase family protein; PFAM: Kelch repeat-containing protein; SMART: Kelch repeat-containing protein; SPTR: Q1J331 Glycosyl hydrolase family 98, putative carbohydrate binding module; PFAM: Kelch motif.
     0.689
Trad_0980
Kelch repeat-containing protein; COGs: COG3055 conserved hypothetical protein; InterPro IPR006652:IPR015915:IPR011043; KEGG: gvi:gll3206 hypothetical protein; PFAM: Kelch repeat-containing protein; SMART: Kelch repeat-containing protein; SPTR: Q7NGG3 Gll3206 protein; PFAM: Kelch motif.
     0.678
Your Current Organism:
Truepera radiovictrix
NCBI taxonomy Id: 649638
Other names: T. radiovictrix DSM 17093, Truepera radiovictrix DSM 17093, Truepera radiovictrix RQ-24, Truepera radiovictrix str. DSM 17093, Truepera radiovictrix strain DSM 17093
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