STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU29583.1PFAM: aminotransferase class-III; KEGG: gwc:GWCH70_1320 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (450 aa)    
Predicted Functional Partners:
ADU29246.1
KEGG: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
    
  0.901
ADU30551.1
KEGG: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase.
    
  0.901
iolA
Methylmalonate-semialdehyde dehydrogenase; Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively.
   
 0.818
ADU29581.1
Transcriptional regulator, CdaR; PFAM: purine catabolism PurC domain protein; KEGG: bpf:BpOF4_09045 transcriptional regulator, PucR family protein.
 
     0.771
ADU30679.1
Pyridoxal phosphate-dependent acyltransferase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
 
  
 0.650
ADU29579.1
Dihydropyrimidinase; KEGG: bpf:BpOF4_09030 phenylhydantoinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase.
 
     0.637
ADU29578.1
TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: bpf:BpOF4_09025 dihydropyrimidine dehydrogenase; PFAM: dihydroorotate oxidase.
 
     0.599
ADU29577.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpf:BpOF4_09020 putative oxidoreductase.
 
   
 0.533
birA
biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.525
ADU31843.1
PFAM: flagellar protein FlaG protein; KEGG: flagellar protein FlaG protein.
    
   0.472
Your Current Organism:
Bacillus cellulosilyticus
NCBI taxonomy Id: 649639
Other names: B. cellulosilyticus DSM 2522, Bacillus cellulosilyticus DSM 2522, Bacillus cellulosilyticus str. DSM 2522, Bacillus cellulosilyticus strain DSM 2522, Bacillus sp. (STRAIN N-4), Bacillus sp. ATCC 21833, Bacillus sp. N-4
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