STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU29904.1PFAM: protein of unknown function DUF1002; KEGG: protein of unknown function DUF1002. (298 aa)    
Predicted Functional Partners:
ADU29903.1
PFAM: major facilitator superfamily MFS_1; KEGG: bmq:BMQ_4525 transporter, major facilitator family.
       0.505
ADU29905.1
PFAM: protein of unknown function DUF107; KEGG: protein of unknown function DUF107.
       0.494
ADU31888.1
KEGG: bha:BH3659 teichoic acid ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
   
    0.455
ADU29902.1
KEGG: bpf:BpOF4_13855 hypothetical protein.
       0.451
ADU30408.1
PFAM: VanZ family protein; KEGG: bha:BH2294 hypothetical protein.
  
     0.441
ADU29900.1
KEGG: bha:BH1400 hypothetical protein.
  
     0.411
ADU31448.1
TIGRFAM: primosome, DnaD subunit; KEGG: bha:BH3145 chromosome replication initiation/membrane attachment protein.
  
     0.406
Your Current Organism:
Bacillus cellulosilyticus
NCBI taxonomy Id: 649639
Other names: B. cellulosilyticus DSM 2522, Bacillus cellulosilyticus DSM 2522, Bacillus cellulosilyticus str. DSM 2522, Bacillus cellulosilyticus strain DSM 2522, Bacillus sp. (STRAIN N-4), Bacillus sp. ATCC 21833, Bacillus sp. N-4
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