STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU30259.1UV-endonuclease UvdE; KEGG: bmq:BMQ_0222 UV damage endonuclease UvdE; TIGRFAM: UV-endonuclease UvdE; PFAM: UV-endonuclease UvdE. (321 aa)    
Predicted Functional Partners:
ADU29679.1
KEGG: bpu:BPUM_1283 spore photoproduct lyase; TIGRFAM: spore photoproduct lyase; PFAM: Radical SAM domain protein.
 
   
 0.560
ADU30258.1
PFAM: Auxin Efflux Carrier; KEGG: bpf:BpOF4_14705 auxin efflux carrier.
       0.550
ADU29379.1
SMART: nuclear protein SET; KEGG: hypothetical protein.
  
     0.442
ADU28867.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: bcg:BCG9842_B2716 cupin domain protein.
  
     0.432
Your Current Organism:
Bacillus cellulosilyticus
NCBI taxonomy Id: 649639
Other names: B. cellulosilyticus DSM 2522, Bacillus cellulosilyticus DSM 2522, Bacillus cellulosilyticus str. DSM 2522, Bacillus cellulosilyticus strain DSM 2522, Bacillus sp. (STRAIN N-4), Bacillus sp. ATCC 21833, Bacillus sp. N-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.