STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selDSelenide, water dikinase; Synthesizes selenophosphate from selenide and ATP. (354 aa)    
Predicted Functional Partners:
selA
L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
 
  
 0.982
ADU31940.1
Pyridoxal phosphate-dependent enzyme; KEGG: oih:OB3204 L-seryl-tRNA selenium transferase; TIGRFAM: pyridoxal phosphate-dependent enzyme; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase.
 
  
 0.954
ADU31676.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 0.922
ADU28991.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
     
 0.907
ADU30104.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: HI0933 family protein.
     
 0.907
ADU31772.1
KEGG: thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
 0.907
ADU30393.1
KEGG: selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3.
 
   
 0.850
ADU29780.1
PFAM: aminotransferase class V; KEGG: afl:Aflv_0737 cysteine desulfurase family aminotransferase.
    
 0.646
ADU30396.1
Manually curated; TIGRFAM: conserved hypothetical protein; KEGG: amt:Amet_3680 putative selenoprotein; PFAM: SelT/selW/selH selenoprotein.
     
 0.583
ADU31497.1
Cysteine desulfurase; KEGG: bcy:Bcer98_3320 aminotransferase class V; PFAM: aminotransferase class V.
    
 0.502
Your Current Organism:
Bacillus cellulosilyticus
NCBI taxonomy Id: 649639
Other names: B. cellulosilyticus DSM 2522, Bacillus cellulosilyticus DSM 2522, Bacillus cellulosilyticus str. DSM 2522, Bacillus cellulosilyticus strain DSM 2522, Bacillus sp. (STRAIN N-4), Bacillus sp. ATCC 21833, Bacillus sp. N-4
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