STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU31445.1PFAM: Sporulation protein YtxC; KEGG: bha:BH3142 hypothetical protein. (309 aa)    
Predicted Functional Partners:
ADU31654.1
TIGRFAM: spore coat protein YutH; KEGG: bha:BH3423 hypothetical protein.
  
     0.750
ADU30879.1
KEGG: bha:BH2601 hypothetical protein.
  
     0.741
ADU28449.1
PFAM: Protein of unknown function DUF2521; KEGG: bha:BH0238 hypothetical protein.
  
     0.729
ADU29751.1
PFAM: Sporulation lipoprotein YhcN/YlaJ-like; KEGG: bpf:BpOF4_11650 hypothetical protein.
  
     0.708
ADU30878.1
KEGG: bcl:ABC2383 hypothetical protein.
  
     0.697
ADU29080.1
KEGG: bpf:BpOF4_10650 hypothetical protein.
  
     0.674
ADU29887.1
KEGG: bha:BH1384 hypothetical protein.
  
     0.674
ADU30479.1
KEGG: ate:Athe_1955 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
    0.671
ADU29943.1
KEGG: bmq:BMQ_4490 ComG operon protein.
  
     0.669
ADU29969.1
KEGG: bpf:BpOF4_01565 stage III sporulation protein AF; TIGRFAM: stage III sporulation protein AF; PFAM: Sporulation stage III protein AF.
  
     0.665
Your Current Organism:
Bacillus cellulosilyticus
NCBI taxonomy Id: 649639
Other names: B. cellulosilyticus DSM 2522, Bacillus cellulosilyticus DSM 2522, Bacillus cellulosilyticus str. DSM 2522, Bacillus cellulosilyticus strain DSM 2522, Bacillus sp. (STRAIN N-4), Bacillus sp. ATCC 21833, Bacillus sp. N-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.