STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ73517.1Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (320 aa)    
Predicted Functional Partners:
SJZ94234.1
FAD/FMN-containing dehydrogenase.
   
 0.862
SKA05505.1
D-lactate dehydrogenase.
   
 0.862
SJZ67445.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.851
SKA11497.1
Glyoxylate/hydroxypyruvate reductase A.
 
  
0.787
SJZ85075.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.785
prpB
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.
 
 
 0.769
SJZ92794.1
D-lactate dehydrogenase (cytochrome).
   
 0.765
SKA24694.1
Phosphoglucomutase.
  
 
 0.756
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.755
SKA17189.1
Acetolactate synthase, small subunit.
   
 0.749
Your Current Organism:
Oceanospirillum multiglobuliferum
NCBI taxonomy Id: 64969
Other names: ATCC 33336, CIP 103383, IFO 13614, NBRC 13614, O. multiglobuliferum, Spirillum multiglobuliferum
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