STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SKA07677.1Signal transduction histidine kinase. (606 aa)    
Predicted Functional Partners:
SJZ75727.1
PAS domain S-box-containing protein.
 
0.999
SJZ88805.1
Signal transduction histidine kinase.
 
0.999
SJZ94737.1
PAS domain S-box-containing protein.
 
0.995
SJZ89164.1
PAS domain S-box-containing protein.
 
0.992
SKA05733.1
PAS domain S-box-containing protein.
 
0.992
SKA27191.1
PAS domain S-box-containing protein.
 
0.992
SJZ71356.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.989
SJZ85659.1
TMAO reductase sytem sensor TorS.
 
 
0.989
SJZ96606.1
PAS domain S-box-containing protein.
 
0.989
SJZ95190.1
Signal transduction histidine kinase.
 
0.988
Your Current Organism:
Oceanospirillum multiglobuliferum
NCBI taxonomy Id: 64969
Other names: ATCC 33336, CIP 103383, IFO 13614, NBRC 13614, O. multiglobuliferum, Spirillum multiglobuliferum
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