STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI37541.1Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. (387 aa)    
Predicted Functional Partners:
SEI77980.1
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
    
 
 0.805
SEI63712.1
Cu+-exporting ATPase.
 
 
 
 0.645
SEI37534.1
Hypothetical protein.
       0.586
SEI38798.1
Heavy-metal-associated domain-containing protein.
   
 
 0.506
SEI54730.1
ArsR family transcriptional regulator; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.504
cmk
Cytidylate kinase.
  
    0.478
SEI38617.1
Agmatine/peptidylarginine deiminase; Belongs to the agmatine deiminase family.
  
    0.456
SEI63813.1
Response regulator receiver domain-containing protein.
   
    0.412
SEI63866.1
Response regulator receiver domain-containing protein.
   
    0.412
SEI75451.1
Response regulator receiver domain-containing protein.
   
    0.412
Your Current Organism:
Pseudospirillum japonicum
NCBI taxonomy Id: 64971
Other names: ATCC 19191, CIP 103373, DSM 7165, IFO 15446, LMG 10146, LMG:10146, NBRC 15446, Oceanospirillum japonicum, P. japonicum, Spirillum japonicum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.